[gmx-users] Gromacs 4.5.5 installation with Cygwin

Mr Bernard Ramos bgrquantum at yahoo.com
Fri Oct 14 19:02:47 CEST 2011


Hi everyone!
 
I am trying to install Gromacs 4.5.5 using Cygwin. I have succesfully compiled and installed fftw-3.2.2 according to the instructions provided below. 
I previously installed a Gromacs-4.5.3 using the same procedure and is still available but as a separate folder.
 
 
http://lists.gromacs.org/pipermail/gmx-users/2009-September/044792.html
 
However, when I am at the step after running "make" (and after "make install", of course), I encounter error messages as follows:

numa_malloc.c:117: error: expected '>' before 'Processor'
numa_malloc.c:117: error: expected '>' before 'ProcNumber'
numa_malloc.c:117: error: expected '=', ',', ';', 'asm' or .....................
...
...
...
make[3]: ***[numa_malloc.lo] Error 1
make[3]: leaving directory '/cygdrive/.....gromacs4.5.5/src/gmxlib/thread_mpi'
make[3]: ***[install-recursive] Error 1
make[3]: leaving directory '/cygdrive/.....gromacs4.5.5/src/gmxlib'
make[3]: ***[install-recursive] Error 1
make[3]: leaving directory '/cygdrive/.....gromacs4.5.5/src'
make[3]: ***[install-recursive] Error 1
 
Please help. Thanks a lot,
 
Bernard
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