[gmx-users] High temperature Simulation

[Kavyashree M]

Hello,

I am sorry those were two different questions..  I wanted to know what
this statement actually mean?
"The set pressure should reflect whatever system you are trying to model."

Thank you
With Regards
Kavya

>
> I don't see the connection to my comment about pressure, but I'll address
> this anyway.  There is no temperature during EM.  Hence with "gen-vel = no"
> then no velocities are generated.  The settings for gen-temp and gen-seed
> are defaults that are assigned when none are provided in the input .mdp
> file.
>
> I seem to recall that a pressure term is written during EM, but it is
> largely meaningless.
>
> -Justin
>
>
> --
> ==============================**==========
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin>
>
> ==============================**==========
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