[gmx-users] box dimension
ndhumal at andrew.cmu.edu
Mon Oct 17 22:05:46 CEST 2011
I have saved the coordinates of snapshot from trajectory in pdb file.
The dimesnion of box in pdb file are
32.805 32.805 32.805 90.00 90.00 90.00 P 1
I am trying to find atoms close to center of box.
there are atoms whose distance from center is more that ~17 A. My center
coordinates are 0.0 0.0 0.0.
How is it possible?
I am using Gromacs 4.0.7 version.
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