[gmx-users] MD duration

[Алексей Раевский]

Hi all.
I want to ask you a question about the length of dynamics. Is it enough to
set time at 3-5ns to see the motion and affinity of the ligand  (nucleotide
derivate) the protein's domain size is nearly 200 aminoacids. The protein
was optimized earlier. Moreover, is it enough for drug design screening to
compare such derivatives?
Thank you!

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