[gmx-users] How to convert a gromacs trajectory to Desmond trajectory format

[Sanku M]

Do you mean converting the gromacs trajectory into pdb file and using vmd to convert the pdb into desmond trajectory ?



________________________________
From: Mark Abraham <Mark.Abraham at anu.edu.au>
To: Discussion list for GROMACS users <gmx-users at gromacs.org>
Sent: Thursday, October 27, 2011 7:16 PM
Subject: Re: [gmx-users] How to convert a gromacs trajectory to Desmond trajectory format


On 28/10/2011 9:46 AM, Sanku M wrote: 
Hi,
>    I was looking for some way out for converting the trajectory-files back and forth between two softwares between gromacs and Desmond. 
>More specifically, if I run a simulation for a particular system using gromacs 4.5.4 , how can I convert it into Desmond trajectory file format ?
There are so many interconversion tools that there must be some
    intermediate format that both can read and write. At worst, PDB.

Mark 
-- 
gmx-users mailing list    gmx-users at gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-request at gromacs.org.
Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20111027/ce8a5a59/attachment.html>