[gmx-users] Error: 4095 characters, fgets2 has size 4095

Carsten Kutzner ckutzne at gwdg.de
Tue Apr 10 11:59:51 CEST 2012


Hi Steven,

you might have to remove files with weird names (such as ._name) in the directory where you run
grompp or in your forcefield directory. 

Carsten


On Apr 10, 2012, at 11:52 AM, Steven Neumann wrote:

> Dear Gmx Users,
>  
> It is 1st time I came across such problem. While preparing my NPT simulation before umbrella samping:
>  
> grompp -f npt_umbrella.mdp -c conf0.gro -p topol.top -n index.ndx -o npt0.tpr
>  
> An input file contains a line longer than 4095 characters, while the buffer passed to fgets2 has size 4095. The line starts with: '20s'
>  
> Its not about the files in bad format as I have never had this problem  - I am using Gromacs 4.5.4 installed on the cluster, I am using PuTTy shell. I always use dos2gmx ibefore processing.
>  
> Can you advise?
>  
> Steven
> 
> -- 
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists




More information about the gromacs.org_gmx-users mailing list