[gmx-users] installation issues

[Mark Abraham]

On 17/04/2012 11:12 PM, anupam sinha wrote:
>
> Dear All,
>               I have tried installing gromacs (after installing fftw3 
> library)on a GPU system using the following :
>
> ./configure --with-fft=fftw3 --enable-float
>
> After I type "make" I get the following error after sometime.
> .
> .
> .
>
> /usr/bin/ld: /home/anupam/fftw-3.3.1/.libs/libfftw3f.a(apiplan.o): 
> relocation R_X86_64_32 against `a local symbol' can not be used when 
> making a shared object; recompile with -fPIC
> /home/anupam/fftw-3.3.1/.libs/libfftw3f.a: could not read symbols: Bad 
> value
> collect2: ld returned 1 exit status
> make[3]: *** [libmd.la <http://libmd.la>] Error 1
> make[3]: Leaving directory `/home/anupam/gromacs-4.5.5/src/mdlib'
> make[2]: *** [all-recursive] Error 1
> make[2]: Leaving directory `/home/anupam/gromacs-4.5.5/src'
> make[1]: *** [all] Error 2
> make[1]: Leaving directory `/home/anupam/gromacs-4.5.5/src'
> make: *** [all-recursive] Error 1
>

See 
http://www.gromacs.org/Documentation/Installation_Instructions#Details_for_building_the_FFTW_prerequisite

Mark
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