[gmx-users] Create a elastic network model -attach a spring between to atoms with force constant

mohan maruthi sena maruthi.sena at gmail.com
Mon Aug 6 09:24:21 CEST 2012


Hi all,
             I want to create an elastic network model for a protein,
in which  i  have selected only c-alpha atoms(removed rest of the
atoms). To attach a spring  between  alpha atoms with some
force(spring) constant k , How can i mention this  in topology file ?


Thanks,
 Mohan



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