August 2012 Archives by date

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Starting: Wed Aug 1 00:19:13 CEST 2012
Ending: Fri Aug 31 22:28:42 CEST 2012
Messages: 747

[gmx-users] Re: Diagnosing + system blowing up Mark Abraham
[gmx-users] Re: Diagnosing + system blowing up Shima Arasteh
[gmx-users] Re: Diagnosing + system blowing up Shima Arasteh
[gmx-users] Re: Diagnosing + system blowing up Justin Lemkul
[gmx-users] A Force Field Paper including Heme Proteins ZHANG Lu
[gmx-users] Fatal error: Number of grid cells is zero. Probably the system and box collapsed. leila karami
[gmx-users] Fatal error: Number of grid cells is zero. Probably the system and box collapsed. Mark Abraham
[gmx-users] About system requirement to gromacs rama david
[gmx-users] About system requirement to gromacs Mark Abraham
[gmx-users] About system requirement to gromacs rama david
[gmx-users] About system requirement to gromacs Mark Abraham
[gmx-users] laptop GPU support Thomas Evangelidis
[gmx-users] About system requirement to gromacs rama david
[gmx-users] About system requirement to gromacs Linus Östberg
[gmx-users] About system requirement to gromacs Mark Abraham
[gmx-users] New tutorial available Justin Lemkul
[gmx-users] Re: [ atomtypes ] are not case sensitive? juanjuan0618
[gmx-users] Re: [ atomtypes ] are not case sensitive? Mark Abraham
[gmx-users] About system requirement to gromacs rama david
[gmx-users] problems when using trjconv or g_msd to process xtc trajectory files with only a portion of all the atoms in the system Christopher Neale
[gmx-users] Preparation of the pdb for MD simulation James Starlight
[gmx-users] About system requirement to gromacs Mark Abraham
[gmx-users] Re: Linear Interaction energy calculations J Peterson
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology Bhavaniprasad.V
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Sebastien Cote
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Thomas Piggot
[gmx-users] LINCS warnings for bonds that do not exist Christian Blouin
[gmx-users] Thole polarization between different molecules avilaverde
[gmx-users] LINCS warnings for bonds that do not exist Justin Lemkul
[gmx-users] (no subject) vidhya sankar
[gmx-users] (no subject) Justin Lemkul
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology Justin Lemkul
[gmx-users] problems when using trjconv or g_msd to process xtc trajectory files with only a portion of all the atoms in the system rocwhite168
[gmx-users] problems when using trjconv or g_msd to process xtc trajectory files with only a portion of all the atoms in the system Mark Abraham
[gmx-users] gmx-user : problem with coordinate number Nur Syafiqah Abdul Ghani
[gmx-users] gmx-user : problem with coordinate number Mark Abraham
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology Bhavaniprasad.V
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology Justin Lemkul
[gmx-users] place carbon nanotube along the z direction Abed Askari
[gmx-users] place carbon nanotube along the z direction Marzinek, Jan
[gmx-users] Thole polarization between different molecules David van der Spoel
[gmx-users] LIE using g_lie J Peterson
[gmx-users] Protein from the line chain Steven Neumann
[gmx-users] Protein from the line chain Justin Lemkul
[gmx-users] Protein from the line chain Steven Neumann
[gmx-users] Protein from the line chain Justin Lemkul
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology bhavaniprasad vipperla
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology Justin Lemkul
[gmx-users] Protein from the line chain Steven Neumann
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology bhavaniprasad vipperla
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology Justin Lemkul
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? David Ackerman
[gmx-users] orientation of CNT Abed Askari
[gmx-users] Re: [ atomtypes ] are not case sensitive? juanjuan0618
[gmx-users] Re: [ atomtypes ] are not case sensitive? Justin Lemkul
[gmx-users] laptop GPU support Roland Schulz
[gmx-users] Adding New Residue to the Gromos 53.6 ff James Starlight
[gmx-users] Re: Adding New Residue to the Gromos 53.6 ff Mark Abraham
[gmx-users] Re: [ atomtypes ] are not case sensitive? juanjuan0618
[gmx-users] Re: [ atomtypes ] are not case sensitive? Justin Lemkul
[gmx-users] Re: Adding New Residue to the Gromos 53.6 ff James Starlight
[gmx-users] How to add new residue(LIG reisdue)? Ali Alizadeh
[gmx-users] How to add new residue(LIG reisdue)? Justin Lemkul
[gmx-users] Re: Adding New Residue to the Gromos 53.6 ff Mark Abraham
[gmx-users] tutorials for Coarse-Grained MD Simulation J Peterson
[gmx-users] Re: Adding New Residue to the Gromos 53.6 ff James Starlight
[gmx-users] Re: Adding New Residue to the Gromos 53.6 ff Mark Abraham
[gmx-users] Create a elastic network model -attach a spring between to atoms with force constant mohan maruthi sena
[gmx-users] tutorials for Coarse-Grained MD Simulation Marzinek, Jan
[gmx-users] Create a elastic network model -attach a spring between to atoms with force constant Mark Abraham
[gmx-users] Re: Adding New Residue to the Gromos 53.6 ff James Starlight
[gmx-users] Re: Adding New Residue to the Gromos 53.6 ff Mark Abraham
[gmx-users] a residue move in extremely large scale in MD Acoot Brett
[gmx-users] a residue move in extremely large scale in MD Mark Abraham
[gmx-users] Compilation of Gromacs 4.5.5 with GPU support: libxml and CUDA toolkit problems ms
[gmx-users] Hydroxyapatite MD odd behavior Ramon Garduno
[gmx-users] Re: How to add new residue(LIG reisdue)? (Justin Lemkul) Justin Lemkul
[gmx-users] Hydroxyapatite MD odd behavior Justin Lemkul
[gmx-users] Hydroxyapatite MD odd behavior Ramon Garduno
[gmx-users] Hydroxyapatite MD odd behavior Justin Lemkul
[gmx-users] NMA and g_nmeig segmentation fault Michael Howard
[gmx-users] NMA and g_nmeig segmentation fault Mark Abraham
[gmx-users] RE: tutorials for Coarse-Grained MD Simulation J Peterson
[gmx-users] RE: tutorials for Coarse-Grained MD Simulation Marzinek, Jan
[gmx-users] Error in ligand coordinate file sai nitin
[gmx-users] .top file Shima Arasteh
[gmx-users] Error in ligand coordinate file Justin Lemkul
[gmx-users] .top file Justin Lemkul
[gmx-users] RE: tutorials for Coarse-Grained MD Simulation J Peterson
[gmx-users] RE: tutorials for Coarse-Grained MD Simulation Justin Lemkul
[gmx-users] About Shake and Lincs Algorithm vidhya sankar
[gmx-users] Gromacs configuration error....configure error : cannot compute sizeof ( off_t)... rama david
[gmx-users] About Shake and Lincs Algorithm Justin Lemkul
[gmx-users] a residue move in extremely large scale in MD Acoot Brett
[gmx-users] Hydroxyapatite MD odd behavior Ramon Garduno
[gmx-users] a residue move in extremely large scale in MD Dallas Warren
[gmx-users] Gromacs configuration error....configure error : cannot compute sizeof ( off_t)... Mark Abraham
[gmx-users] Simulated annealing in implicit solvent Ольга Кононова
[gmx-users] Simulated annealing in implicit solvent Justin Lemkul
[gmx-users] a residue move in extremely large scale in MD Acoot Brett
[gmx-users] Question about Thermodynamic Integration Asaf Farhi
[gmx-users] Abnormal alignment of waters after NVT simulation Du Jiangfeng (BIOCH)
[gmx-users] Gromacs configuration error....configure error : cannot compute sizeof ( off_t)... rama david
AW: [gmx-users] a residue move in extremely large scale in MD Rausch, Felix
[gmx-users] What 's the format of tabble for dihedral potential ? 肖强
[gmx-users] Question about Thermodynamic Integration Albert
[gmx-users] Error in ligand coordinate file sai nitin
[gmx-users] Question about Thermodynamic Integration Justin Lemkul
[gmx-users] Error in ligand coordinate file Justin Lemkul
[gmx-users] Question about Thermodynamic Integration Asaf Farhi
[gmx-users] Question about Thermodynamic Integration Asaf Farhi
[gmx-users] Gromacs to AMBER sai nitin
[gmx-users] Error in ligand coordinate file sai nitin
[gmx-users] Question about Thermodynamic Integration Justin Lemkul
[gmx-users] Error in ligand coordinate file Justin Lemkul
[gmx-users] Question about Thermodynamic Integration Asaf Farhi
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Sebastien Cote
[gmx-users] Question about Thermodynamic Integration Justin Lemkul
[gmx-users] add a new bond to a force field Shima Arasteh
[gmx-users] add a new bond to a force field Justin Lemkul
[gmx-users] a residue move in extremely large scale in MD Dallas Warren
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Mark Abraham
[gmx-users] Abnormal alignment of waters after NVT simulation Mark Abraham
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Peter C. Lai
[gmx-users] mdrun-gpu cuong nguyen
[gmx-users] Question about Thermodynamic Integration Asaf Farhi
[gmx-users] mdrun-gpu Mark Abraham
[gmx-users] D20 simulation/Topology file and force field Deepak Ojha
[gmx-users] GPU - protein in water Steven Neumann
[gmx-users] Error in ligand coordinate file sai nitin
[gmx-users] Error in ligand coordinate file Justin Lemkul
[gmx-users] NVT equilibration Shima Arasteh
[gmx-users] NVT equilibration Marzinek, Jan
[gmx-users] NVT equilibration Peter C. Lai
[gmx-users] NVT equilibration Shima Arasteh
[gmx-users] NVT equilibration Peter C. Lai
[gmx-users] Protein - Ligand tetramer simulation Ankita naithani
[gmx-users] Protein - Ligand tetramer simulation Justin Lemkul
[gmx-users] Protein - Ligand tetramer simulation Ankita naithani
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Sebastien Cote
[gmx-users] About getting running time from a Gromacs Run jesmin jahan
[gmx-users] mdrun error Shima Arasteh
[gmx-users] mdrun error Justin Lemkul
[gmx-users] dihedral as Collective Variable in Umbrella Sampling tarak karmakar
[gmx-users] Visualizing a process Shima Arasteh
[gmx-users] Visualizing a process Justin Lemkul
[gmx-users] Visualizing a process Shima Arasteh
[gmx-users] Visualizing a process Justin Lemkul
[gmx-users] Visualizing a process Shima Arasteh
[gmx-users] Visualizing a process Justin Lemkul
[gmx-users] Re: restraints placed on the boundary region of a lipid membrane Andreea
[gmx-users] fixing split molecules in trajectory file Paula Andrea Delgado Pinzon
[gmx-users] fixing split molecules in trajectory file Justin Lemkul
[gmx-users] About getting running time from a Gromacs Run Mark Abraham
[gmx-users] About getting running time from a Gromacs Run jesmin jahan
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology Bhavaniprasad.V
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Peter C. Lai
[gmx-users] dihedral as CV in Umbrella Sampling tarak karmakar
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology leonines
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology Mark Abraham
[gmx-users] Empirical potential for Pi stacking interactions? Delmotte, Antoine
[gmx-users] Re: number of coordinates in coordinate file (system_inflated.gro, 9331) number of coordinates in coordinate file does not match topology Justin Lemkul
[gmx-users] How it possible find detail way for start preparing INPUT files for simulation of Hypoxanthine (aq) solution by Gromacs Mohammad Hossein Kowsari
[gmx-users] How it possible find detail way for start preparing INPUT files for simulation of Hypoxanthine (aq) solution by Gromacs Justin Lemkul
[gmx-users] PMF - Protein-Mebrane dariush
[gmx-users] PMF - Protein-Mebrane Justin Lemkul
[gmx-users] Protein-ligand - genion error Ankita naithani
[gmx-users] Protein-ligand - genion error Justin Lemkul
[gmx-users] Umbrella sampling Paula Andrea Delgado Pinzon
[gmx-users] Umbrella sampling Justin Lemkul
[gmx-users] Protein-ligand - genion error Ankita naithani
[gmx-users] Protein-ligand - genion error Justin Lemkul
[gmx-users] Protein-ligand - genion error Ankita naithani
[gmx-users] a residue move in extremely large scale in MD Acoot Brett
[gmx-users] a residue move in extremely large scale in MD Justin Lemkul
[gmx-users] a residue move in extremely large scale in MD Acoot Brett
[gmx-users] a residue move in extremely large scale in MD Justin Lemkul
[gmx-users] a residue move in extremely large scale in MD Albert
[gmx-users] Re: Empirical potential for Pi stacking interactions? Andreea
[gmx-users] Re: Empirical potential for Pi stacking interactions? Delmotte, Antoine
[gmx-users] a residue move in extremely large scale in MD Acoot Brett
[gmx-users] a residue move in extremely large scale in MD Justin Lemkul
[gmx-users] a residue move in extremely large scale in MD Justin Lemkul
[gmx-users] simmulated annealing tarak karmakar
[gmx-users] simmulated annealing Mark Abraham
[gmx-users] simmulated annealing tarak karmakar
[gmx-users] Parrinello-Rahman with surface-tension coupling Felipe Pineda, PhD
[gmx-users] Re: mass center of each molecule akn
[gmx-users] time evolutions of an angle akn
[gmx-users] Re: mass center of each molecule Mark Abraham
[gmx-users] time evolutions of an angle Mark Abraham
[gmx-users] trajectory file formats Jim Kress
[gmx-users] implicit solvent protein simulations with charmm Sai Pooja
[gmx-users] trajectory file formats Broadbent, Richard
[gmx-users] grommp warning Shima Arasteh
[gmx-users] Topology file for simulation of inorganic compounds Deepak Ojha
[gmx-users] grommp warning Shima Arasteh
[gmx-users] checkpoint file Juliette N.
[gmx-users] checkpoint file Matthias Ernst
[gmx-users] grommp warning Justin Lemkul
[gmx-users] Topology file for simulation of inorganic compounds Justin Lemkul
[gmx-users] checkpoint file Juliette N.
[gmx-users] checkpoint file Justin Lemkul
[gmx-users] grommp warning Shima Arasteh
[gmx-users] checkpoint file Matthias Ernst
[gmx-users] Topology file for simulation of inorganic compounds David van der Spoel
[gmx-users] grommp warning Justin Lemkul
[gmx-users] checkpoint file Juliette N.
[gmx-users] checkpoint file Justin Lemkul
[gmx-users] checkpoint file Juliette N.
[gmx-users] checkpoint file Justin Lemkul
[gmx-users] checkpoint file Juliette N.
[gmx-users] checkpoint file Justin Lemkul
[gmx-users] checkpoint file Juliette N.
[gmx-users] checkpoint file Juliette N.
[gmx-users] checkpoint file Justin Lemkul
[gmx-users] checkpoint file Juliette N.
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Peter C. Lai
[gmx-users] Questions regarding Polarization Energy Calculation jesmin jahan
[gmx-users] a residue move in extremely large scale in MD Dallas Warren
[gmx-users] checkpoint file Justin Lemkul
[gmx-users] potential energy Tom Dupree
[gmx-users] Doubts over g_lie usage J Peterson
[gmx-users] desired no of water molecules tarak karmakar
[gmx-users] a residue move in extremely large scale in MD Mark Abraham
[gmx-users] checkpoint file Mark Abraham
[gmx-users] desired no of water molecules Mark Abraham
[gmx-users] potential energy Mark Abraham
[gmx-users] trajectory file formats Mark Abraham
[gmx-users] desired no of water molecules tarak karmakar
[gmx-users] desired no of water molecules Peter C. Lai
[gmx-users] implicit solvent protein simulations with charmm Mark Abraham
[gmx-users] desired no of water molecules tarak karmakar
[gmx-users] RE: Doubts over g_lie usage Tom Dupree
[gmx-users] desired no of water molecules Mark Abraham
[gmx-users] desired no of water molecules Peter C. Lai
[gmx-users] Questions regarding Polarization Energy Calculation Mark Abraham
[gmx-users] Parrinello-Rahman with surface-tension coupling Mark Abraham
[gmx-users] RE: Doubts over g_lie usage J Peterson
[gmx-users] desired no of water molecules tarak karmakar
[gmx-users] desired no of water molecules tarak karmakar
[gmx-users] RE: RE: Doubts over g_lie usage Tom Dupree
[gmx-users] RE: RE: Doubts over g_lie usage J Peterson
[gmx-users] Parrinello-Rahman with surface-tension coupling Felipe Pineda, PhD
[gmx-users] box of simulation mohammad agha
[gmx-users] box of simulation mohammad agha
[gmx-users] box of simulation Emanuel Birru
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Felipe Pineda, PhD
[gmx-users] a residue move in extremely large scale in MD Acoot Brett
[gmx-users] box of simulation mohammad agha
[gmx-users] Fw: box of simulation mohammad agha
[gmx-users] Fw: box of simulation Emanuel Birru
[gmx-users] a residue move in extremely large scale in MD Mark Abraham
[gmx-users] box of simulation Mark Abraham
[gmx-users] box of simulation mohammad agha
[gmx-users] Fw: box of simulation Mark Abraham
[gmx-users] box of simulation mohammad agha
[gmx-users] Ions topology Ankita naithani
[gmx-users] box of simulation Mark Abraham
[gmx-users] Ions topology Mark Abraham
[gmx-users] Ions topology Ankita naithani
[gmx-users] PLUMED-GROMACS force constant, angle unit tarak karmakar
[gmx-users] box of simulation mohammad agha
[gmx-users] PLUMED-GROMACS force constant, angle unit David van der Spoel
[gmx-users] Questions regarding Polarization Energy Calculation jesmin jahan
[gmx-users] checkpoint file rama david
[gmx-users] grommp warning rama david
[gmx-users] grommp warning Justin Lemkul
[gmx-users] grommp warning rama david
[gmx-users] grommp warning Justin Lemkul
[gmx-users] PhD position in Göttingen/Germany Jochen Hub
[gmx-users] simulation Shima Arasteh
[gmx-users] simulation Justin Lemkul
[gmx-users] simulation Shima Arasteh
[gmx-users] PLUMED-GROMACS force constant, angle unit tarak karmakar
[gmx-users] PLUMED-GROMACS force constant, angle unit Justin Lemkul
[gmx-users] a residue move in extremely large scale in MD Dallas Warren
[gmx-users] RE: RE: RE: Doubts over g_lie usage Tom Dupree
[gmx-users] Parameters for bonded interactions Sebastien Cote
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Sebastien Cote
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Sebastien Cote
[gmx-users] Parameters for bonded interactions Mark Abraham
[gmx-users] grommp warning rama david
[gmx-users] grommp warning Mark Abraham
[gmx-users] grommp warning rama david
[gmx-users] grommp warning Mark Abraham
[gmx-users] my VMD Acoot Brett
[gmx-users] box of simulation mohammad agha
[gmx-users] Parameters for bonded interactions Sebastien Cote
[gmx-users] Parameters for bonded interactions Sebastien Cote
[gmx-users] Parameters for bonded interactions Mark Abraham
[gmx-users] box of simulation mohammad agha
[gmx-users] Parameters for bonded interactions Sebastien Cote
[gmx-users] box of simulation Mark Abraham
[gmx-users] Topology file Ankita naithani
[gmx-users] box of simulation mohammad agha
[gmx-users] Re: Topology file Ankita naithani
[gmx-users] Re: Topology file Justin Lemkul
[gmx-users] Cross-correlation maps James Starlight
[gmx-users] when? Albert
[gmx-users] when? Elton Carvalho
[gmx-users] when? Albert
[gmx-users] when? Justin Lemkul
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Christopher Neale
[gmx-users] PMF - Protein-Mebrane Christopher Neale
[gmx-users] my VMD Christopher Neale
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Peter C. Lai
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Christopher Neale
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Sebastien Cote
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Christopher Neale
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Peter C. Lai
[gmx-users] box vectors - regd ramesh cheerla
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Thomas Piggot
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Christopher Neale
[gmx-users] Ordering of hydrogen bonds in -hbn and -hbm output in g_hbond Andrew DeYoung
[gmx-users] Ordering of hydrogen bonds in -hbn and -hbm output in g_hbond Justin Lemkul
[gmx-users] Re: Ordering of hydrogen bonds in -hbn and -hbm output in g_hbond Andrew DeYoung
[gmx-users] Re: Ordering of hydrogen bonds in -hbn and -hbm output in g_hbond Justin Lemkul
[gmx-users] box vectors - regd Mark Abraham
[gmx-users] RE: Re: potential energy Tom Dupree
[gmx-users] box vectors - regd ramesh cheerla
[gmx-users] box vectors - regd Mark Abraham
[gmx-users] my VMD rama david
[gmx-users] my VMD rama david
[gmx-users] Questions regarding Polarization Energy Calculation jesmin jahan
[gmx-users] Questions regarding Polarization Energy Calculation Mark Abraham
[gmx-users] Questions regarding Polarization Energy Calculation jesmin jahan
[gmx-users] Questions regarding Polarization Energy Calculation Mark Abraham
[gmx-users] CHARMM36 - Smaller Area per lipid for POPE - Why? Felipe Pineda, PhD
[gmx-users] RE: RE: RE: Doubts over g_lie usage J Peterson
[gmx-users] Ordering of hydrogen bonds in -hbn and -hbm output in g_hbond Erik Marklund
[gmx-users] Ordering of hydrogen bonds in -hbn and -hbm output in g_hbond Erik Marklund
[gmx-users] box vectors - regd ramesh cheerla
[gmx-users] About Number of Components of eigen Vector vidhya sankar
[gmx-users] RMSF error when fitting to average structure tdgrant1
[gmx-users] simmulated annealing excess temperature........................ tarak karmakar
[gmx-users] RMSF error when fitting to average structure Justin Lemkul
[gmx-users] simmulated annealing excess temperature........................ Justin Lemkul
[gmx-users] simmulated annealing excess temperature........................ tarak karmakar
[gmx-users] Ca ion simulation incorporated in protein structure ram bio
[gmx-users] Ca ion simulation incorporated in protein structure Justin Lemkul
[gmx-users] Re: RMSF error when fitting to average structure tdgrant1
[gmx-users] Re: RMSF error when fitting to average structure Justin Lemkul
[gmx-users] Re: RMSF error when fitting to average structure tdgrant1
[gmx-users] Re: RMSF error when fitting to average structure Justin Lemkul
[gmx-users] Re: RMSF error when fitting to average structure tdgrant1
[gmx-users] Re: RMSF error when fitting to average structure Justin Lemkul
[gmx-users] Re: RMSF error when fitting to average structure tdgrant1
[gmx-users] Re: RMSF error when fitting to average structure Justin Lemkul
[gmx-users] atom numbering dariush
[gmx-users] atom numbering Justin Lemkul
[gmx-users] Protein-POPC bilayer Shima Arasteh
[gmx-users] Protein-POPC bilayer Jianguo Li
[gmx-users] Protein-POPC bilayer Justin Lemkul
[gmx-users] Protein-POPC bilayer Jianguo Li
[gmx-users] Protein-POPC bilayer Justin Lemkul
[gmx-users] Protein-POPC bilayer Mark Abraham
[gmx-users] Protein-POPC bilayer Peter C. Lai
[gmx-users] Protein-POPC bilayer Justin Lemkul
[gmx-users] Protein-POPC bilayer Peter C. Lai
[gmx-users] Protein-POPC bilayer Dallas Warren
[gmx-users] Questions regarding Polarization Energy Calculation jesmin jahan
[gmx-users] Protein-POPC bilayer Shima Arasteh
[gmx-users] Protein-POPC bilayer Peter C. Lai
[gmx-users] Questions regarding Polarization Energy Calculation Mark Abraham
[gmx-users] LINCS shahid nayeem
[gmx-users] Protein-POPC bilayer Shima Arasteh
[gmx-users] LINCS Mark Abraham
[gmx-users] Protein-POPC bilayer Peter C. Lai
[gmx-users] Protein-POPC bilayer Shima Arasteh
[gmx-users] LINCS shahid nayeem
[gmx-users] LINCS Mark Abraham
[gmx-users] LINCS shahid nayeem
[gmx-users] LINCS Mark Abraham
[gmx-users] structure factor Tetsuo Shu
[gmx-users] xtc file and trr file Acoot Brett
[gmx-users] how to check total charge by command? Albert
[gmx-users] xtc file and trr file Chandan Choudhury
[gmx-users] how to check total charge by command? Justin Lemkul
[gmx-users] xtc file and trr file Mark Abraham
[gmx-users] Re: atom numbering dariush
[gmx-users] Re: atom numbering Justin Lemkul
[gmx-users] Questions regarding Polarization Energy Calculation jesmin jahan
[gmx-users] Re: atom numbering dariush
[gmx-users] 4 question Hossein Lanjanian
[gmx-users] 4 question Justin Lemkul
[gmx-users] 4 question Shima Arasteh
[gmx-users] 4 question Justin Lemkul
[gmx-users] 4 question Shima Arasteh
[gmx-users] xtc file and trr file Acoot Brett
[gmx-users] xtc file and trr file Justin Lemkul
[gmx-users] xtc file and trr file Acoot Brett
[gmx-users] xtc file and trr file Justin Lemkul
[gmx-users] xtc file and trr file Acoot Brett
[gmx-users] xtc file and trr file Justin Lemkul
[gmx-users] Questions regarding Polarization Energy Calculation Mark Abraham
[gmx-users] Questions regarding Polarization Energy Calculation jesmin jahan
[gmx-users] 2 chain protein and VMD Acoot Brett
[gmx-users] 2 chain protein and VMD Joaquim Rui de Castro Rodrigues
[gmx-users] structure factor Tetsuo Shu
[gmx-users] Question about cut-off values with respect to the neighbor list Andrew DeYoung
[gmx-users] KALP15 In DPPC Shima Arasteh
[gmx-users] 2 chain protein and VMD Acoot Brett
[gmx-users] 2 chain protein and VMD Mark Abraham
[gmx-users] KALP15 In DPPC Justin Lemkul
[gmx-users] Question about cut-off values with respect to the neighbor list Justin Lemkul
[gmx-users] Regarding Production MD error kirubakaran palani
[gmx-users] Regarding Production MD error Emanuel Birru
[gmx-users] Regarding Production MD error kirubakaran palani
[gmx-users] Regarding Production MD error Mark Abraham
[gmx-users] parameters in *.mdp files Shima Arasteh
[gmx-users] parameters in *.mdp files Justin Lemkul
[gmx-users] parameters in *.mdp files Shima Arasteh
[gmx-users] parameters in *.mdp files Shima Arasteh
[gmx-users] parameters in *.mdp files Justin Lemkul
[gmx-users] very strange area/lipid value for POPC membrane system Albert
[gmx-users] very strange area/lipid value for POPC membrane system Justin Lemkul
[gmx-users] very strange area/lipid value for POPC membrane system Albert
[gmx-users] eigenvectors with nan values Joaquim Rui de Castro Rodrigues
[gmx-users] very strange area/lipid value for POPC membrane system Justin Lemkul
[gmx-users] When to use Dispersion Correction for Lipid Bilayers David Ackerman
[gmx-users] eigenvectors with nan values Mark Abraham
[gmx-users] When to use Dispersion Correction for Lipid Bilayers Mark Abraham
[gmx-users] When to use Dispersion Correction for Lipid Bilayers Michael Shirts
[gmx-users] do_dssp segmental fault Debajyoti Ghosh
[gmx-users] When to use Dispersion Correction for Lipid Bilayers Thomas Piggot
[gmx-users] very strange area/lipid value for POPC membrane system Peter C. Lai
[gmx-users] PMF - error bars Steven Neumann
[gmx-users] LIE calculations sai nitin
[gmx-users] g_tune_pme cannot be executed zifeng li
[gmx-users] parameters for output control mohammad agha
[gmx-users] Parallel QM/MM with orca Jouko Virtanen
[gmx-users] Parallel QM/MM with orca Jose Tusell
[gmx-users] parameters for output control Justin Lemkul
[gmx-users] LIE calculations sai nitin
[gmx-users] LIE calculations Justin Lemkul
[gmx-users] simmulated annealing excess temperature........................ Elton Carvalho
[gmx-users] double precision or single precision? Albert
[gmx-users] double precision or single precision? Justin Lemkul
[gmx-users] Hbond Shake and Gromacs Version Related Sapna Sarupria
[gmx-users] Hbond Shake and Gromacs Version Related Mark Abraham
[gmx-users] Hbond Shake and Gromacs Version Related Sapna Sarupria
[gmx-users] Hbond Shake and Gromacs Version Related Mark Abraham
[gmx-users] Hbond Shake and Gromacs Version Related Sapna Sarupria
[gmx-users] rvdw and dispersion correction for amber99sb Yun Shi
[gmx-users] parameters for output control mohammad agha
[gmx-users] rvdw and dispersion correction for amber99sb Mark Abraham
[gmx-users] parameters for output control Mark Abraham
[gmx-users] rvdw and dispersion correction for amber99sb Yun Shi
[gmx-users] any alternative methods? Albert
[gmx-users] any alternative methods? Mark Abraham
[gmx-users] parameters for output control mohammad agha
[gmx-users] Looking for GPU benchmarks Mathieu38
[gmx-users] kalp15 in dppc and EM iteration Shima Arasteh
[gmx-users] Pi stacking potential and parameters in Gromacs? Delmotte, Antoine
[gmx-users] kalp15 in dppc and EM iteration Shima Arasteh
[gmx-users] eigenvectors with nan values Joaquim Rui de Castro Rodrigues
[gmx-users] Pi stacking potential and parameters in Gromacs? Justin Lemkul
[gmx-users] segmentation fault with mdrun Deepak Ojha
[gmx-users] any alternative methods? Justin Lemkul
[gmx-users] segmentation fault with mdrun Justin Lemkul
[gmx-users] EM in kalp15_DPPC Shima Arasteh
[gmx-users] EM in kalp15_DPPC Justin Lemkul
[gmx-users] EM in kalp15_DPPC Shima Arasteh
[gmx-users] EM in kalp15_DPPC Justin Lemkul
[gmx-users] EM in kalp15_DPPC Shima Arasteh
[gmx-users] EM in kalp15_DPPC Justin Lemkul
[gmx-users] EM in kalp15_DPPC Shima Arasteh
[gmx-users] EM in kalp15_DPPC Justin Lemkul
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] periodicity in msd calculation Bala subramanian
[gmx-users] deltaG from PMF Justin Lemkul
[gmx-users] periodicity in msd calculation Justin Lemkul
[gmx-users] Looking for integration tips: multiple-GPU devices & platform LSF (plus checkpointing) Chris Dagdigian
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] deltaG from PMF Justin Lemkul
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] deltaG from PMF Justin Lemkul
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] deltaG from PMF Justin Lemkul
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] deltaG from PMF Justin Lemkul
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] Re: deltaG from PMF Thomas Schlesier
[gmx-users] Re: deltaG from PMF Steven Neumann
[gmx-users] Problem with Gromacs installation with GPU. jesmin jahan
[gmx-users] deltaG from PMF Thomas Schlesier
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] deltaG from PMF Justin Lemkul
[gmx-users] Trouble with domain decomposition in direction X virginia miguel
[gmx-users] Trouble with domain decomposition in direction X Justin Lemkul
[gmx-users] EM in kalp15_DPPC Shima Arasteh
[gmx-users] dihedral type equation tarak karmakar
[gmx-users] when new FF would be available in Gromacs website? Albert
[gmx-users] when new FF would be available in Gromacs website? Justin Lemkul
[gmx-users] Looking for GPU benchmarks Szilárd Páll
[gmx-users] Compilation of Gromacs 4.5.5 with GPU support: libxml and CUDA toolkit problems Szilárd Páll
[gmx-users] Problem with Gromacs installation with GPU. Szilárd Páll
[gmx-users] Problem with Gromacs installation with GPU. jesmin jahan
[gmx-users] dihedral type equation Mark Abraham
[gmx-users] elastic network model -protein contracting mohan maruthi sena
[gmx-users] elastic network model -protein contracting Mark Abraham
[gmx-users] when new FF would be available in Gromacs website? Albert
[gmx-users] any alternative methods? Albert
[gmx-users] any alternative methods? Mark Abraham
[gmx-users] any alternative methods? Albert
[gmx-users] any alternative methods? Albert
[gmx-users] any alternative methods? Mark Abraham
[gmx-users] any alternative methods? Albert
[gmx-users] pdb file error Sylwia Chmielewska
[gmx-users] pdb file error Justin Lemkul
[gmx-users] any alternative methods? Justin Lemkul
[gmx-users] NPT Equilibration error Ankita naithani
[gmx-users] NPT Equilibration error Justin Lemkul
[gmx-users] pdb file error Sylwia Chmielewska
[gmx-users] pdb file error Justin Lemkul
[gmx-users] pdb file error Sylwia Chmielewska
[gmx-users] any alternative methods? Albert
[gmx-users] any alternative methods? Justin Lemkul
[gmx-users] any alternative methods? Albert
[gmx-users] any alternative methods? Justin Lemkul
[gmx-users] periodicity in msd calculation Bala subramanian
[gmx-users] periodicity in msd calculation Justin Lemkul
[gmx-users] Problem with Gromacs 4.6 installation jesmin jahan
[gmx-users] any alternative methods? Albert
[gmx-users] Regarding urea+water.itp dhaval patel
[gmx-users] equilibrium stage runs for too long Clare
[gmx-users] equilibrium stage runs for too long Justin Lemkul
[gmx-users] Different values of area per lipid with/without protein Kulleperuma Kulleperuma
[gmx-users] Different values of area per lipid with/without protein Justin Lemkul
[gmx-users] what's the difference between gen_seed and ld_seed? Albert
[gmx-users] what's the difference between gen_seed and ld_seed? Justin Lemkul
[gmx-users] Problem with "The requested platform "CUDA" could not be found" jesmin jahan
[gmx-users] what's the difference between gen_seed and ld_seed? Peter C. Lai
[gmx-users] what's the difference between gen_seed and ld_seed? Albert
[gmx-users] Re: equilibrium stage runs for too long Clare
[gmx-users] Re: equilibrium stage runs for too long Justin Lemkul
[gmx-users] Re: equilibrium stage runs for too long Dr. Vitaly Chaban
[gmx-users] Re: equilibrium stage runs for too long Clare
[gmx-users] Re: equilibrium stage runs for too long Justin Lemkul
[gmx-users] Re: equilibrium stage runs for too long Dr. Vitaly Chaban
[gmx-users] Re: Cross-correlation maps James Starlight
[gmx-users] Gromacs-4.5.5 on GPU : Floating point exception San B
[gmx-users] what's the difference between gen_seed and ld_seed? Thomas Schlesier
[gmx-users] Re: equilibrium stage runs for too long Clare
[gmx-users] Re: equilibrium stage runs for too long Justin Lemkul
[gmx-users] Re: equilibrium stage runs for too long Clare
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] BAR / g_bar problems David van der Spoel
[gmx-users] CHARMM and FEP calculations Wright, Louise
[gmx-users] g_rms and g_rmsdist on initial structure Hsin-Lin Chiang
[gmx-users] g_rms and g_rmsdist on initial structure Erik Marklund
[gmx-users] deltaG from PMF Thomas Schlesier
[gmx-users] Re: g_rms and g_rmsdist on initial structure Hsinlin
[gmx-users] Re: g_rms and g_rmsdist on initial structure Hsinlin
[gmx-users] KALP15-DPPC Tutorial Shima Arasteh
[gmx-users] BAR / g_bar problems Michael Shirts
[gmx-users] Re: g_rms and g_rmsdist on initial structure Erik Marklund
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] Electrostatics and van Der Waals in Gromacs Delmotte, Antoine
[gmx-users] g_tune_pme restart Albert
[gmx-users] KALP15-DPPC Tutorial Justin Lemkul
[gmx-users] g_tune_pme restart Roland Schulz
[gmx-users] Topology- make bonds with certain cut-off distance mohan maruthi sena
[gmx-users] how to optimize performance of IBM Power 775? Albert
[gmx-users] g_tune_pme optimal PME nodes for multiple nodes Chandan Choudhury
[gmx-users] Force fields, is there a review article? Ladasky
[gmx-users] Topology- make bonds with certain cut-off distance Erik Marklund
[gmx-users] Force fields, is there a review article? Luca Mollica
[gmx-users] User specified potential functions toby10222224
[gmx-users] Topology- make bonds with certain cut-off distance mohan maruthi sena
[gmx-users] Error:The selected GPU (#0, Tesla M2090) is not supported by Gromacs! jesmin jahan
[gmx-users] Error:The selected GPU (#0, Tesla M2090) is not supported by Gromacs! Justin Lemkul
[gmx-users] Error:The selected GPU (#0, Tesla M2090) is not supported by Gromacs! jesmin jahan
[gmx-users] Error:The selected GPU (#0, Tesla M2090) is not supported by Gromacs! Justin Lemkul
[gmx-users] grompp in KALP15-DPPC Shima Arasteh
[gmx-users] Elastic network model -gromacs mohan maruthi sena
[gmx-users] grompp in KALP15-DPPC Justin Lemkul
[gmx-users] grompp in KALP15-DPPC Shima Arasteh
[gmx-users] grompp in KALP15-DPPC Justin Lemkul
[gmx-users] grompp in KALP15-DPPC Shima Arasteh
[gmx-users] how to optimize performance of IBM Power 775? Christopher Neale
[gmx-users] Force fields, is there a review article? David van der Spoel
[gmx-users] Protein-POPC bilayer Shima Arasteh
[gmx-users] NPT equilibration in KALP15-DPPC Shima Arasteh
[gmx-users] NPT equilibration in KALP15-DPPC Justin Lemkul
[gmx-users] Elastic network model -building mohan maruthi sena
[gmx-users] GROMACS command for energy calculation Acoot Brett
[gmx-users] GROMACS command for energy calculation Justin Lemkul
[gmx-users] GROMACS command for energy calculation Acoot Brett
[gmx-users] GROMACS command for energy calculation Justin Lemkul
[gmx-users] GROMACS command for energy calculation Mark Abraham
[gmx-users] User specified potential functions Mark Abraham
[gmx-users] Topology- make bonds with certain cut-off distance Mark Abraham
[gmx-users] CHARMM and FEP calculations Mark Abraham
[gmx-users] Re: Cross-correlation maps Mark Abraham
[gmx-users] GROMACS command for energy calculation Acoot Brett
[gmx-users] GROMACS command for energy calculation Justin Lemkul
[gmx-users] User specified potential functions toby10222224
[gmx-users] BAR / g_bar problems Dallas Warren
[gmx-users] NPT equilibration in KALP15-DPPC Shima Arasteh
[gmx-users] GROMACS command for energy calculation Acoot Brett
[gmx-users] GROMACS command for energy calculation Mark Abraham
[gmx-users] NPT equilibration in KALP15-DPPC Justin Lemkul
[gmx-users] GROMACS command for energy calculation Acoot Brett
[gmx-users] GROMACS command for energy calculation Justin Lemkul
[gmx-users] overlaps atoms during solvation(genbox) Vasumathi Velachi
[gmx-users] overlaps atoms during solvation(genbox) Justin Lemkul
[gmx-users] test, please ignore Rossen Apostolov
[gmx-users] Re: Looking for GPU benchmarks Mathieu38
[gmx-users] Re: [gmx-developers] Mails rejected with "The message's content type was not explicitly allowed" Rossen Apostolov
[gmx-users] Re: Looking for GPU benchmarks Justin Lemkul
[gmx-users] Variation of box angles - regd ramesh cheerla
[gmx-users] Broken protein after EM Shima Arasteh
[gmx-users] Broken protein after EM Justin Lemkul
[gmx-users] GROMACS command for energy calculation Mark Abraham
[gmx-users] Re: Cross-correlation maps James Starlight
[gmx-users] NPT equilibration in KALP15-DPPC Shima Arasteh
[gmx-users] NPT equilibration in KALP15-DPPC Justin Lemkul
[gmx-users] Re: Looking for GPU benchmarks Szilárd Páll
[gmx-users] RE: Looking for GPU benchmarks Mathieu38
[gmx-users] Incorrect bond in top file Shima Arasteh
[gmx-users] Incorrect bond in top file Justin Lemkul
[gmx-users] Problem with incorrect GB-Polarization Energy Value jesmin jahan
[gmx-users] Question about Multi-level parallelization: MPI and OpenMP jesmin jahan
[gmx-users] Elastic network model -building XAvier Periole
[gmx-users] Elastic network model -building mohan maruthi sena
[gmx-users] Incorrect bond in top file Shima Arasteh
[gmx-users] Force Field Choice Marcelo Depolo
[gmx-users] Force Field Choice Justin Lemkul
[gmx-users] Incorrect bond in top file Justin Lemkul
[gmx-users] Elastic network model -building XAvier Periole
[gmx-users] Incorrect bond in top file Shima Arasteh
[gmx-users] Incorrect bond in top file Shima Arasteh
[gmx-users] Incorrect bond in top file Justin Lemkul
[gmx-users] Incorrect bond in top file Shima Arasteh
[gmx-users] Re: Cross-correlation maps Tsjerk Wassenaar
[gmx-users] Incorrect bond in top file Justin Lemkul
[gmx-users] Question about Multi-level parallelization: MPI and OpenMP Mark Abraham
[gmx-users] Question about Multi-level parallelization: MPI and OpenMP jesmin jahan
[gmx-users] Problem with incorrect GB-Polarization Energy Value Mark Abraham
[gmx-users] mdrun_gpu on NVidia Quadro 2000 Mauricio Carrillo Tripp
[gmx-users] Re: Cross-correlation maps James Starlight
[gmx-users] Re: Cross-correlation maps Mark Abraham
[gmx-users] Re: Cross-correlation maps James Starlight
[gmx-users] Re: Cross-correlation maps Mark Abraham
[gmx-users] Re: Cross-correlation maps Tsjerk Wassenaar
[gmx-users] Re: Looking for GPU benchmarks Mathieu38
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] deltaG from PMF Erik Marklund
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] deltaG from PMF Erik Marklund
[gmx-users] deltaG from PMF Steven Neumann
[gmx-users] Re: mdrun on GROMACS 3.3.1 Sheeba
[gmx-users] water layer with g_select Bala subramanian
[gmx-users] Variation of box angles - regd Tsjerk Wassenaar
[gmx-users] deltaG from PMF Erik Marklund
[gmx-users] water layer with g_select Mark Abraham
[gmx-users] NPT equilibration in KALP15-DPPC Shima Arasteh
[gmx-users] NPT equilibration in KALP15-DPPC Justin Lemkul
[gmx-users] (no subject) Lingyun Wang
[gmx-users] (no subject) Justin Lemkul
[gmx-users] 4 question Hossein Lanjanian
[gmx-users] 4 question Hossein Lanjanian
[gmx-users] Re: mdrun on GROMACS 3.3.1 Francesca Vitalini
[gmx-users] g_tune_pme for multiple nodes Chandan Choudhury
[gmx-users] Re: Looking for GPU benchmarks Szilárd Páll
[gmx-users] RE: Looking for GPU benchmarks Szilárd Páll
[gmx-users] mdrun_gpu on NVidia Quadro 2000 Szilárd Páll
[gmx-users] 4 question Szilárd Páll
[gmx-users] virtual site of Au crystal fatemeh ramezani
[gmx-users] Problem with OMP_NUM_THREADS=12 mpirun -np 16 mdrun_mpi jesmin jahan
[gmx-users] mismatch atoms? Albert
[gmx-users] Problem with OMP_NUM_THREADS=12 mpirun -np 16 mdrun_mpi David van der Spoel
[gmx-users] mismatch atoms? Mark Abraham
[gmx-users] Problem with OMP_NUM_THREADS=12 mpirun -np 16 mdrun_mpi Szilárd Páll
[gmx-users] Positions available for Postdocs and PhD students in the Molecular Biomechanics group at HITS, Heidelberg Frauke Graeter
[gmx-users] water layer with g_select Bala subramanian
[gmx-users] water layer with g_select Mark Abraham
[gmx-users] water layer with g_select Bala subramanian
[gmx-users] 4 question Hossein Lanjanian
[gmx-users] Charges for Coulomb potential Delmotte, Antoine
[gmx-users] water layer with g_select Mark Abraham
[gmx-users] Charges for Coulomb potential Mark Abraham
[gmx-users] Problem with OMP_NUM_THREADS=12 mpirun -np 16 mdrun_mpi jesmin jahan
[gmx-users] Problem with incorrect GB-Polarization Energy Value jesmin jahan
[gmx-users] Problem with incorrect GB-Polarization Energy Value Justin Lemkul
[gmx-users] Problem with incorrect GB-Polarization Energy Value jesmin jahan
[gmx-users] customized pairtypes with OPLS/AA Krzysztof Murzyn
[gmx-users] Problem with incorrect GB-Polarization Energy Value Mark Abraham
[gmx-users] Problem with incorrect GB-Polarization Energy Value Justin Lemkul
[gmx-users] customized pairtypes with OPLS/AA Justin Lemkul
[gmx-users] customized pairtypes with OPLS/AA Krzysztof Murzyn
[gmx-users] customized pairtypes with OPLS/AA Justin Lemkul
[gmx-users] Problem with incorrect GB-Polarization Energy Value jesmin jahan
[gmx-users] Problem with incorrect GB-Polarization Energy Value Justin Lemkul
[gmx-users] Charges for Coulomb potential Delmotte, Antoine
[gmx-users] Problem with incorrect GB-Polarization Energy Value jesmin jahan
[gmx-users] Problem with incorrect GB-Polarization Energy Value Mark Abraham
[gmx-users] Charges for Coulomb potential Mark Abraham
[gmx-users] extra Oxygen ....upon modification of middle residue tarak karmakar
[gmx-users] extra Oxygen ....upon modification of middle residue Justin Lemkul
[gmx-users] Re: mdrun on GROMACS 3.3.1 Sheeba
[gmx-users] System neutralization in Thermodynamic Integration Leandro Bortot
[gmx-users] Problem with OMP_NUM_THREADS=12 mpirun -np 16 mdrun_mpi Roland Schulz
[gmx-users] extra Oxygen ....upon modification of middle residue tarak karmakar
[gmx-users] Generating insertion mutants shahid nayeem
[gmx-users] Charges for Coulomb potential Delmotte, Antoine
[gmx-users] Elastic network model mohan maruthi sena
[gmx-users] do_dssp segmental fault archana sonawani
[gmx-users] Elastic network model Tsjerk Wassenaar
[gmx-users] Elastic network model mohan maruthi sena
[gmx-users] Elastic network model Tsjerk Wassenaar
[gmx-users] Elastic network model mohan maruthi sena
[gmx-users] Elastic network model Mark Abraham
[gmx-users] Elastic network model Mark Abraham
[gmx-users] Elastic network model mohan maruthi sena
[gmx-users] Problem with OMP_NUM_THREADS=12 mpirun -np 16 mdrun_mpi Szilárd Páll
[gmx-users] building_insertion_mutants shahid nayeem
[gmx-users] generating tripeptides in a box Pim Frederix
[gmx-users] generating tripeptides in a box Tsjerk Wassenaar
[gmx-users] Generating insertion mutants Tsjerk Wassenaar
[gmx-users] SangbaeLee: about Gromos forcefield regarding DDM detergent Lee, Sangbae
[gmx-users] building_insertion_mutants Erik Marklund
[gmx-users] help with "interaction of type atom in the topology database, but an atom of that name was not found in residue" error Katrina Lexa
[gmx-users] Glycoproteion MD 陈应广
[gmx-users] help with "interaction of type atom in the topology database, but an atom of that name was not found in residue" error Justin Lemkul
[gmx-users] Glycoproteion MD Justin Lemkul
[gmx-users] Re: help with "interaction of type atom in the topology"... klexa
[gmx-users] Re: help with "interaction of type atom in the topology"... Mark Abraham
[gmx-users] Variation of box angles - regd ramesh cheerla
[gmx-users] Structure factor reference Tetsuo Shu
[gmx-users] Glycoproteion MD lloyd riggs
[gmx-users] Umbrella Sampling Pull code Problem Steinbrecher, Thomas (IPC)
回复： [gmx-users] Glycoproteion MD 陈应广
[gmx-users] Glycoproteion MD Laercio Pol Fachin
[gmx-users] Umbrella Sampling Pull code Problem Jianguo Li
[gmx-users] Umbrella Sampling Pull code Problem Bogdan Costescu
[gmx-users] Turning off electrostatics between groups using custom tables? Smitty
[gmx-users] Re: Umbrella Sampling Pull code Problem Sheeba
[gmx-users] Turning off electrostatics between groups using custom tables? Mark Abraham
[gmx-users] Re: Turning off electrostatics between groups using custom tables? Smitty
[gmx-users] Glycoproteion MD Leandro Bortot
[gmx-users] Elastic network model mohan maruthi sena
[gmx-users] Elastic network model Bogdan Costescu
[gmx-users] Re: Force fields, is there a review article? Ladasky
[gmx-users] Elastic network model Warren Gallin

Last message date: Fri Aug 31 22:28:42 CEST 2012
Archived on: Thu Nov 14 12:13:17 CET 2013

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