[gmx-users] Ions topology

Mark Abraham Mark.Abraham at anu.edu.au
Tue Aug 14 12:16:10 CEST 2012


On 14/08/2012 7:45 PM, Ankita naithani wrote:
> Dear All,
>
> I wanted to ask that from where can I get the topologies and
> co-ordinate information for Mg and K ions? For the ligands, I could
> get it from PRODRG software as suggested in the tutorial but my
> protein needs the crucial ions Mg and K before I can begin with my
> simulations.

Availability depends on the force field, so start looking in its files 
distributed by GROMACS.

Mark



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