[gmx-users] 2 chain protein and VMD

Acoot Brett acootbrett at yahoo.com
Sat Aug 18 10:35:37 CEST 2012

  Dear All,
After the production MD for a 2-chain protein complex (chain A and chain B) was done, I used VMD to observe the trajectory. I want to color the 2 chains in different color. 
However it seems during the observation of the trajectory by VMD, VMD treated both of the 2 chains as chain X, and thus the 2 chains cannot be colored differently.
Do you have any method or suggestion to color the 2 chains in different color by VMD in the trajectory observation process?

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