[gmx-users] Error during compilation of Gromacs-4.5.5

[Mark Abraham]

Hard to say. Your compiler is prehistoric, and things to do with pthreads
are the province of the compiler, so getting a more recent version will
probably fix it.

Mark

On Mon, Dec 10, 2012 at 7:32 AM, BHARATI DUTTA <bharati.dutta at piramal.com>wrote:

> Hi,
>
> The following error pops up during compilation of Gromacs-4.5.5 :
>
> /home/gromacs-4.5.5/src/gmxlib/.libs/libgmx.so: undefined reference to
> `pthread_setaffinity_np'. Could you please help me fix it?
>
> I am installing it on
>
> uname -m = x86_64
> uname -r = 2.6.9-5.ELsmp
> uname -s = Linux
> uname -v = #1 SMP Wed Jan 5 19:29:47 EST 2005
> cc (GCC) 3.4.3 20041212 (Red Hat 3.4.3-9.EL4)
>
> glibc : glibc -2.3.4
>
>
>
> Thanks & Regards - Bharati
>
>
> Bharati Dutta
> Research Associate
> Discovery Informatics
> Piramal Life Sciences Limited
> 1, Nirlon Complex,
> Goregaon Link Road,
> Goregaon(E)
> Mumbai, Maharashtra 400 063
> India
> bharati.dutta at piramal.com
>
>
>
>
>
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