[gmx-users] Error during compilation of Gromacs-4.5.5
mark.j.abraham at gmail.com
Mon Dec 10 09:08:54 CET 2012
Hard to say. Your compiler is prehistoric, and things to do with pthreads
are the province of the compiler, so getting a more recent version will
probably fix it.
On Mon, Dec 10, 2012 at 7:32 AM, BHARATI DUTTA <bharati.dutta at piramal.com>wrote:
> The following error pops up during compilation of Gromacs-4.5.5 :
> /home/gromacs-4.5.5/src/gmxlib/.libs/libgmx.so: undefined reference to
> `pthread_setaffinity_np'. Could you please help me fix it?
> I am installing it on
> uname -m = x86_64
> uname -r = 2.6.9-5.ELsmp
> uname -s = Linux
> uname -v = #1 SMP Wed Jan 5 19:29:47 EST 2005
> cc (GCC) 3.4.3 20041212 (Red Hat 3.4.3-9.EL4)
> glibc : glibc -2.3.4
> Thanks & Regards - Bharati
> Bharati Dutta
> Research Associate
> Discovery Informatics
> Piramal Life Sciences Limited
> 1, Nirlon Complex,
> Goregaon Link Road,
> Mumbai, Maharashtra 400 063
> bharati.dutta at piramal.com
> This communication may contain information that is proprietary
> confidential or exempt from disclosure. If you are not the intended
> recipient please note that any other dissemination distribution use or
> copying of this communication is strictly prohibited. Anyone who receives
> this message in error should notify the sender immediately by telephone or
> by return e-mail and delete it from his or her computer.
> gmx-users mailing list gmx-users at gromacs.org
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> * Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
More information about the gromacs.org_gmx-users