[gmx-users] (no subject)

Anik Sen aniksen at csmcri.org
Wed Jan 11 12:07:14 CET 2012

I have already done that but the problem persisits.

From: gmx-users-bounces at gromacs.org [gmx-users-bounces at gromacs.org] on behalf of Javier Cerezo [jcb1 at um.es]
Sent: Wednesday, January 11, 2012 1:56 PM
To: gmx-users at gromacs.org
Subject: Re: [gmx-users] (no subject)


You should compile your fftw with --enable-shared if you want to link your gromacs installation to shared libraries (which is the default in the latest versions). Check the installation instructions in the website.


El 11/01/12 08:20, Anik Sen escribió:
Im having problems installing Gromacs. I followed the GROMACS installation instructions as suggested by justin. But in vain. The same error is coming again and again. Please suggest.

The error file is given below:

/usr/bin/ld: /usr/local/lib/libfftw3.a(plan-dft-r2c-3d.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC

/usr/local/lib/libfftw3.a: could not read symbols: Bad value

collect2: ld returned 1 exit status

make[3]: *** [libmd_d.la<http://libmd_d.la/>] Error 1

make[3]: Leaving directory `/home/ganguly/Gromacs/gromacs-4.5.5/src/mdlib'

make[2]: *** [all-recursive] Error 1

make[2]: Leaving directory `/home/ganguly/Gromacs/gromacs-4.5.5/src'

make[1]: *** [all] Error 2

make[1]: Leaving directory `/home/ganguly/Gromacs/gromacs-4.5.5/src'

make: *** [all-recursive] Error 1

Thanx in advance
Anik Sen
CSIR-Central Salt & Marine Chemicals Research Institute,
Gijubhai Badheka Marg.
Bhavnagar, Gujarat 364002

PhD Student
Physical Chemistry
Universidad de Murcia
Murcia (Spain)
Phone: (+34)868887434
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20120111/2ef4d7ec/attachment.html>

More information about the gromacs.org_gmx-users mailing list