[gmx-users] error in mdrun (2)

reisingere at rostlab.informatik.tu-muenchen.de reisingere at rostlab.informatik.tu-muenchen.de
Mon Jul 9 15:32:11 CEST 2012


When I run the md run again I get still the already mentioned error and
additionally this one:

Fatal error:
66 particles communicated to PME node 2 are more than 2/3 times the
cut-off out of the domain decomposition cell of their charge group in
dimension x.
This usually means that your system is not well equilibrated.


I really don't know how to equilibrate it better.

Thank you,
Eva




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