[gmx-users] more than one protonation per residue with pdb2gmx

reisingere at rostlab.informatik.tu-muenchen.de reisingere at rostlab.informatik.tu-muenchen.de
Wed Jul 11 16:24:18 CEST 2012


Hi everybody,

I wanted to ask if there is a possibility to tell pdb2gmx which residues I
want to be protonated or not.
So that I can for example say HIS at position 29 shell be protonated twice.

I need this for further electrostatic analysis.

Thank you,
Eva




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