[gmx-users] g_saltbr speed
hmkvsri at gmail.com
Thu Jul 12 10:51:06 CEST 2012
Dear Gromacs users,
I was running the saltbridge calculations for a dimeric
protein simulation using g_saltbr, But its taking very
long time, almost four days still its not completed.
Could anyone has suggestion regarding this issue? I am
using the same system -
Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz
where i ran MD. Please give some suggestion as to how to
increase the speed of calculation.
Command i issued was:
g_saltbr -f ../traj.xtc -s md.tpr -t 0.4 -sep
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