[gmx-users] g_saltbr speed
Justin A. Lemkul
jalemkul at vt.edu
Fri Jul 13 18:53:29 CEST 2012
On 7/13/12 12:05 PM, Kavyashree M wrote:
> Its 50ns 25000 frames. the xtc file is 695MB. it has 16GB RAM. So will
> that be insufficient? I have previously run other analysis which used to take
> huge memory, for eg. covariance analysis, in a system with much lesser memory
> even though CPU usage was low the job used to finish. But in this case its not
I can't see a reason why the file itself would present a problem. I have run
g_saltbr on similarly sized systems. Sorry, I can't offer an explanation as to
why it's stopping prematurely.
Justin A. Lemkul, Ph.D.
Department of Biochemistry
jalemkul[at]vt.edu | (540) 231-9080
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