[gmx-users] angle constraints
tarak karmakar
tarak20489 at gmail.com
Tue Jul 24 07:21:36 CEST 2012
Dear All,
I am constraining one angle in my protein sample by incorporating " [
constraints ]" block in topology file as
[ constraints ]
; index1 index2 index3 funct angle
6064 6063 6065 1 180.0
while doing that its showing the following error
Program grompp, VERSION 4.5.5
Source code file: topdirs.c, line: 174
Fatal error:
Invalid constraints type 6065
For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors
Then I rechecked the angle block, that specific angle is there in that
angle section, part of it as follows
6039 6057 6058 1
6039 6057 6059 1
6058 6057 6059 1
6064 6063 6065 1
6067 6066 6068 1
6067 6066 6069 1
6068 6066 6069 1
6071 6070 6072 1
6071 6070 6073 1
6072 6070 6073 1
[ constraints ]
; index1 index2 index3 funct angle
6064 6063 6065 1 180.0
[ dihedrals ]
; ai aj ak al funct c0 c1
c2 c3 c4
--
Tarak
Molecular Simulation Lab.
Chemistry and Physics of Materials Unit
JNCASR
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