[gmx-users] g_clustsize
Justin Lemkul
jalemkul at vt.edu
Tue Jul 24 12:41:46 CEST 2012
On 7/24/12 2:34 AM, mohammad agha wrote:
> Dear Gromacs Users,
>
> I don't know what is the quantity of -cut in g_clustsize for different systems, exactly!
>
It is the cutoff value that determines if two molecules are in the same cluster.
If atoms in different molecules have a distance less than the value specified
in -cut, they are in the same cluster.
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
More information about the gromacs.org_gmx-users
mailing list