[gmx-users] converting Desmond trajectories to Gromacs

Mark Abraham Mark.Abraham at anu.edu.au
Thu Jul 26 11:06:31 CEST 2012


On 26/07/2012 5:01 PM, Nidhi Jatana wrote:
> Dear Sir/Madam
> I am running simulations on a membrane protein using Desmond and I
> want to calculate area per lipid for the entire trajectory. I can
> convert the trajectories to those of Gromacs using VMD. What else do I
> need in order to calculate area per lipid using Gromacs?

http://www.gromacs.org/Documentation/How-tos/Using_VMD_plugins_to_read_trajectory_formats_not_native_to_GROMACS

Mark



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