[gmx-users] Gromacs installation

rama david ramadavidgroup at gmail.com
Mon Jul 30 10:56:43 CEST 2012


Hi GROMACS FRIENDS,
      I have dell T3500 precision, 64 bits, 6C workstation with fedora
operating system.
I want to install gromacs in parallel mode with mpi...
I am planning to performed Replica Exchange Molecular Dynamics ( REMD ).
As per REMD instruction
http://www.gromacs.org/Documentation/How-tos/REMD?highlight=remd,
GROMACS should not compile in threading.
I install open mpi with  command line yum -y install openmpi.
I found that fedora add/remove software package has gromacs 4.5.5
version that can be
easily installed by  command yum  ..
It  enlisted with  total 15 different packages : eg.. two packages..

1. GROMACS Open MPI binaries and libraries
2 . GROMACS OPEN MPI shared libraries

and a more..

Please can you tell me which packages I have to install so that I can
run GROMACS 4.5.5 in parallel to do REMD.


Thank you in advance....
Have a nice day..


With Best Wishes and regards.
Rama David



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