[gmx-users] Incomplete frame

[Justin A. Lemkul]

On 6/1/12 8:02 AM, Turgay Cakmak wrote:
> Hi gromacs users,
> I concatenated 7 trajectory files (each one has 10ns simulation) using
> "trajcat". Then, when I used "gmxcheck", I get following error.
> Reading frame       0 time    0.000
> # Atoms  68393
> Precision 0.001 (nm)
> Reading frame   13000 time 26000.000
> *WARNING: Incomplete frame: nr 13739 time 27478
> *
> But, when I check the non-concatenated files with gmxcheck, I didn't get any
> problem..
> I am so confused. Any suggestion will be really appreciated...

Try the concatenation again.  Perhaps a filesystem blip caused an incomplete 
frame to be written.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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