[gmx-users] g_select problem (Invalid command line argument:)

Tsjerk Wassenaar tsjerkw at gmail.com
Thu Mar 8 10:06:09 CET 2012


Hi Leila,

You didn't enclose your selection string, you enclosed some words in
your selection string.

> g_select -f com_ta_full_3.xtc -s com_ta_full.tpr -n index.ndx -oi -select
> "Close to Protein" 'resname' 'SOL' and within 0.25 of group 'Protein'

g_select -f com_ta_full_3.xtc -s com_ta_full.tpr -n index.ndx -oi
-select '"Close to Protein" resname SOL and within 0.25 of group
Protein'

Cheers,

Tsjerk



-- 
Tsjerk A. Wassenaar, Ph.D.

post-doctoral researcher
Molecular Dynamics Group
* Groningen Institute for Biomolecular Research and Biotechnology
* Zernike Institute for Advanced Materials
University of Groningen
The Netherlands



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