[gmx-users] saltbridges newbie question

Peter C. Lai pcl at uab.edu
Tue May 1 18:50:55 CEST 2012


If you use -sep it should just be distance over time of a given charged pair.

The only functional difference between g_saltbr and g_dist is that g_saltbr
tries to be intelligent and preselects the pairs for you...

On 2012-05-01 03:08:24PM +0200, Denis Kazakiewicz wrote:
> Hello
> Would you please give a hint or reference about how to interpret salt 
> bridge analysis graphs (output of g_saltbr command)?
> Thank you
> 
> Denis

> -- 
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists


-- 
==================================================================
Peter C. Lai			| University of Alabama-Birmingham
Programmer/Analyst		| KAUL 752A
Genetics, Div. of Research	| 705 South 20th Street
pcl at uab.edu			| Birmingham AL 35294-4461
(205) 690-0808			|
==================================================================




More information about the gromacs.org_gmx-users mailing list