[gmx-users] jointly-couple lipids to theromstat - MARTINI force-field
Weingarth, M.H.
M.H.Weingarth at uu.nl
Thu May 3 13:47:21 CEST 2012
Hello,
I am a bit confused by a comment which I find in all MARTINI example md.mdp scripts concerning the tc-groups :
It is stated there to couple groups separately:
<< MARTINI -Normal temperature and pressure coupling schemes can be used. It
; is recommended to couple individual groups in your system seperately>>
I am simulating a mixed dppc:dppg membrane (see below my parameters). Even these two different lipids-types should be coupled separately? (and how about Na+ (Qd particles) and water - also separately?)
I would greatly appreciate any comment on this issue.
Thanks a lot
Markus
my parameter:
; Temperature coupling:
tcoupl = berendsen
; Groups to couple separately:
tc-grps = DPPC DPPG W NAA Protein
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