[gmx-users] How to over come syntax errors

Erik Marklund erikm at xray.bmc.uu.se
Thu May 17 11:12:06 CEST 2012


17 maj 2012 kl. 08.40 skrev Seera Suryanarayana:

> Dear all Gromacs users,
> 
> While i am running gromacs software i am getting the following syntax errors.
> 
> 
> Fatal error:
> Syntax error - File 1AX8.top, line 7934
> Last line read:
> '## #include"ions.itp"'

Aren't semicolons used to make comments in top-files? I assume you intended to comment out the include statement.

Erik

> 
> 
> I am unable to create _b4em.gro files
> 
> Is there any explanation why is this happening? I would aooreciate any help.I am new in using MD and gromacs in particular.
> 
> Suryanarayana Seera,
> PhD student,
> Hyderabad,
> India.
> 
> 
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-----------------------------------------------
Erik Marklund, PhD
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,    75124 Uppsala, Sweden
phone:    +46 18 471 6688        fax: +46 18 511 755
erikm at xray.bmc.uu.se
http://www2.icm.uu.se/molbio/elflab/index.html

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