[gmx-users] trjconv_snapshot

rama david ramadavidgroup at gmail.com
Thu May 24 16:17:32 CEST 2012

Hi ,

You run extended simulation of 10 ns  on your first  10ns simulation .
You get traj20ns.xtc.
these new trajectory contain all the tme frame from onwards 10ns.
So if you are giving command

trjconv –f traj20ns.xtc –s topol.tpr –b 10000 –e 10000 –o
snapshot20ns.gro      (Note: traj20ns.xtc is not a full trajectory, it just
a trajectory of second 10ns simulation)

with traj20ns.xtc if you need 20 ns snapshot use -b 20000 -e 20000

With Best Wishes,

Rama David
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