[gmx-users] comparing simulations with diffrent forcefields

[Kowsar Bagherzadeh]

Dear users, 
 
I have done a Ligand-Protein Simulation using 43a1.ff forcefield and ssDNA-Protein (the same protein I used for ligand protein simulation) using amber99sd-ILDN forcefield. Is it possible to compare the results of the two simulation with eachother? No?
 
Sogol 
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