[gmx-users] Regarding g_wham options

[Nitin Agrawal]

When I am using the command -zprof0. it is not giving the desired result. I
am using it as

 g_wham -b 5000 -zprof0 -6.0 -it tpr_files.dat -if pullf_files.dat -o
profile_new1.xvg -hist histo_new1.xvg -unit kCal

but the lowest point in the graph is still -6.0 in the y axis and not set
to 0.0

Am i using the parameters wrong?

On Wed, May 30, 2012 at 1:42 PM, Nitin Agrawal
<nitinyugalagrawal at gmail.com>wrote:

> Thank you
>
>
> On Wed, May 30, 2012 at 1:39 PM, Justin A. Lemkul <jalemkul at vt.edu> wrote:
>
>>
>>
>> On 5/30/12 6:29 AM, Nitin Agrawal wrote:
>>
>>> Hi all,
>>>
>>> I want to set the lowest point in my curve as zero instead of negative
>>> number.
>>> Can anyone tell me which option to use to do that?
>>>
>>>
>> Set the desired value with -zprof0.
>>
>> -Justin
>>
>> --
>> ==============================**==========
>>
>> Justin A. Lemkul, Ph.D.
>> Research Scientist
>> Department of Biochemistry
>> Virginia Tech
>> Blacksburg, VA
>> jalemkul[at]vt.edu | (540) 231-9080
>> http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin>
>>
>> ==============================**==========
>> --
>> gmx-users mailing list    gmx-users at gromacs.org
>> http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users>
>> Please search the archive at http://www.gromacs.org/**
>> Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before posting!
>> Please don't post (un)subscribe requests to the list. Use the www
>> interface or send it to gmx-users-request at gromacs.org.
>> Can't post? Read http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists>
>>
>
>
>
> --
> Regards,
> Nitin Agrawal,
> Master's Student (Bioinformatics)
> University of Turku,Finland
> B.Tech (Biotechnology)
> National Institute of Technology,Durgapur,India
> Blog:http://notjustanyotherblog.blogspot.com/
>



-- 
Regards,
Nitin Agrawal,
Master's Student (Bioinformatics)
University of Turku,Finland
B.Tech (Biotechnology)
National Institute of Technology,Durgapur,India
Blog:http://notjustanyotherblog.blogspot.com/
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20120530/70982e01/attachment.html>