[gmx-users] Multiple protein simulations in a box

Rajeswari A. rajeswari.biotech at gmail.com
Fri Nov 2 10:52:03 CET 2012

Dear Gromacs Users,
I want to simulate multiple number of proteins in a box. I am very confused
in choosing what MD method will be useful to solve my problem. Can i do it
with regular molecular dynamics simulations? I am not sure whether
diffusion of solutes are taken care in standard MD. or should i opt
brownian dynamics for this purpose? Is there any special method where i can
do simulate multiple proteins in a box?

Thank you.

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