[gmx-users] Multiple protein simulations in a box

rama david ramadavidgroup at gmail.com
Fri Nov 2 11:04:56 CET 2012

Dear Rajeswari,
 May I ask you why you want to do the multiple protein simulation.??
Please mention the purpose clearly, otherwise it is hard to understand
what you are doing  and what you need???,

With best wishes and Regards,
Rama David

On Fri, Nov 2, 2012 at 3:22 PM, Rajeswari A. <rajeswari.biotech at gmail.com>wrote:

> Dear Gromacs Users,
> I want to simulate multiple number of proteins in a box. I am very confused
> in choosing what MD method will be useful to solve my problem. Can i do it
> with regular molecular dynamics simulations? I am not sure whether
> diffusion of solutes are taken care in standard MD. or should i opt
> brownian dynamics for this purpose? Is there any special method where i can
> do simulate multiple proteins in a box?
> Thank you.
> Rajeswari.
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