[gmx-users] libfftw3f.so.3 error known but not able to solve

gromacs query gromacsquery at gmail.com
Sun Nov 4 18:44:14 CET 2012


Dear Justin,

thanks its working, sorry it was my mistake I used wrongly /usr/local/bin,
so export LD_LIBRARY_PATH=/usr/local/lib is working fine now.

regards,

On Sun, Nov 4, 2012 at 11:02 PM, Justin Lemkul <jalemkul at vt.edu> wrote:

>
>
> On 11/4/12 12:23 PM, gromacs query wrote:
>
>> Dear Justin,
>>
>> Just to add: I can echo all variables (
>> http://www.gromacs.org/**Documentation/Terminology/**
>> Environment_Variables<http://www.gromacs.org/Documentation/Terminology/Environment_Variables>
>> )
>> except GMXLIB so my bashrc is like this: which is still not helping
>>
>>
>> export GMXLIB=/usr/local/gromacs/**share/gromacs/top
>> export LD_LIBRARY_PATH=/usr/local/bin
>> #export PATH=$PATH:$LD_LIBRARY_PATH (tried by including and not including
>> this)
>>
>
> You need the LD_LIBRARY_PATH to find libraries, not executables.  My hint
> was that the mechanism worked like PATH, not that it should be joined to it.
>
> Depending on your system configuration, LD_LIBRARY_PATH may already be set
> (so check by using echo to see what it is set to).  If it is not set, then:
>
> export LD_LIBRARY_PATH=/usr/local/lib
>
> If it is set already, then:
>
> export LD_LIBRARY_PATH=$LD_LIBRARY_**PATH:/usr/local/lib
>
>
> -Justin
>
> --
> ==============================**==========
>
> Justin A. Lemkul, Ph.D.
> Research Scientist
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin>
>
> ==============================**==========
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