[gmx-users] G_sas change in hydrophilic and hydrophobic surface area

[rama david]

Dear user ,
I simulate the two  protein in random coil position, when they come close
they form antiparallel  beta sheet structure.
   I want to calculate the change in hydrophilic and hydrophobic surface
area over my simulation time.
For usig g_sas  Should I have to make the different index group for
hydrophilic and hydrophobic residues
Or should only have to select the option protein both the time.

Thank you..



With best wishes and regards,
Rama david