[gmx-users] xmgrace graphs

[Justin Lemkul]

On 10/3/12 12:06 AM, naga sundar wrote:
> Dear Pramod
>
>                   use the command
>
>                   xmgrace  -nxy file1.xvg  file2.xvg
>
>                   Instead of file1 and file2 use ur file name.
>

Distance plots produced by g_dist have four data sets (distance and x,y,z 
components) so plotting in this way can be quite messy.  Leave out the -nxy if 
you want to only plot the total distance and not the remaining (x,y,z) components.

-Justin

> On Tue, Oct 2, 2012 at 8:49 PM, ram bio <rmbio861 at gmail.com> wrote:
>
>> Dear Gromacs users,
>>
>> I am trying to find inter atomic distances between ligand atoms and
>> protein residues using Gromacs commands and could generate individual
>> xvg files, but could not figure out how to merge or show all the xvg
>> files in one graph using xmgrace.
>>
>> Cold you please suggest?
>>
>> Thanks and Regards,
>>
>> Pramod
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>
>
>

-- 
========================================

Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================