[gmx-users] xmgrace graphs

[ram bio]

Thanks

On Wed, Oct 3, 2012 at 6:04 AM, Justin Lemkul <jalemkul at vt.edu> wrote:
>
>
> On 10/3/12 12:06 AM, naga sundar wrote:
>>
>> Dear Pramod
>>
>>                   use the command
>>
>>                   xmgrace  -nxy file1.xvg  file2.xvg
>>
>>                   Instead of file1 and file2 use ur file name.
>>
>
> Distance plots produced by g_dist have four data sets (distance and x,y,z
> components) so plotting in this way can be quite messy.  Leave out the -nxy
> if you want to only plot the total distance and not the remaining (x,y,z)
> components.
>
> -Justin
>
>
>> On Tue, Oct 2, 2012 at 8:49 PM, ram bio <rmbio861 at gmail.com> wrote:
>>
>>> Dear Gromacs users,
>>>
>>> I am trying to find inter atomic distances between ligand atoms and
>>> protein residues using Gromacs commands and could generate individual
>>> xvg files, but could not figure out how to merge or show all the xvg
>>> files in one graph using xmgrace.
>>>
>>> Cold you please suggest?
>>>
>>> Thanks and Regards,
>>>
>>> Pramod
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>>
>>
>>
>
> --
> ========================================
>
> Justin A. Lemkul, Ph.D.
> Research Scientist
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
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