[gmx-users] Adding phosphate to protein

reisingere at rostlab.informatik.tu-muenchen.de reisingere at rostlab.informatik.tu-muenchen.de
Mon Sep 3 09:51:12 CEST 2012


Hi,
I have my protein without phosphorylations and now I want to phosphorylate
one residue of my protein.
Is this possible?

Thank you

> can you be a bit more specific? Are you expecting to phosphorylate the
> protein along the trajectory or did you want to run continuous simulations
> with different phosphorylation states?
>
>
> On 2012-09-03 09:30:58AM +0200,
> reisingere at rostlab.informatik.tu-muenchen.de wrote:
>> Hi everybody,
>>
>> I want to add a phosphate to my protein. Is this possible with gromacs?
>>
>> Thank you
>>
>> --
>> gmx-users mailing list    gmx-users at gromacs.org
>> http://lists.gromacs.org/mailman/listinfo/gmx-users
>> * Please search the archive at
>> http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
>> * Please don't post (un)subscribe requests to the list. Use the
>> www interface or send it to gmx-users-request at gromacs.org.
>> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> --
> ==================================================================
> Peter C. Lai			| University of Alabama-Birmingham
> Programmer/Analyst		| KAUL 752A
> Genetics, Div. of Research	| 705 South 20th Street
> pcl at uab.edu			| Birmingham AL 35294-4461
> (205) 690-0808			|
> ==================================================================
>
> --
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> * Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>





More information about the gromacs.org_gmx-users mailing list