[gmx-users] How to create a box of molecules with three layers?

Justin Lemkul jalemkul at vt.edu
Thu Sep 20 12:56:19 CEST 2012

On 9/20/12 6:54 AM, Ali Alizadeh wrote:
> Dear Justin
> I know ,I studied it, but it was two layer, I want to add three layer into
> my system!

Right, you're not going to find an exact how-to for everything you might dream 
up.  You can apply the same logic from the tutorial (creating independent 
solvent boxes and placing them in the same unit cell via manual positioning) to 
do what you want.



Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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