[gmx-users] amber99 with berger's lipids

Justin Lemkul jalemkul at vt.edu
Sat Apr 6 16:29:17 CEST 2013

On Sat, Apr 6, 2013 at 8:45 AM, James Starlight <jmsstarlight at gmail.com>wrote:

> That paper suggests of using 1.0 nm for all cut-offs
> http://pubs.acs.org/doi/abs/10.1021/ct200491c
> that seems strange to me because with gromos-56 I've used 1.2 nm cutoffs.
And what was your basis for that decision?  What makes you think that
AMBER99 can even be combined with the Berger lipid force field?




Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540)


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