[gmx-users] Re: Illegal instruction (core dumped) - trjconv

[Steven Neumann]

On Mon, Apr 29, 2013 at 10:11 AM, Steven Neumann <s.neumann08 at gmail.com>wrote:

> Dear Gmx Users,
>
> I produced my trajectory using Gromacs 4.6 on GPUs.
> When I try:
>
> trjconv -s md298_gpu.tpr -f md298_gpu.xtc -pbc mol -ur compact -o
> md298_gpuURcomp.xtc
>
> Select a group: 0
> Selected 0: 'System'
> Reading frame       0 time    0.000
> Precision of md298_gpu.xtc is 0.001 (nm)
> Using output precision of 0.001 (nm)
> Back Off! I just backed up md298_gpuURcomp.xtc to ./#md298_gpuURcomp.xtc.2#
> Illegal instruction (core dumped)
> Would you advise?
>
> Steven
>

What I found out is that options -pbc mol or -pbc whole does not work and
give this error.

Any suggestions please?

Steven

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