[gmx-users] Re: Illegal instruction (core dumped) - trjconv
szilard.pall at cbr.su.se
Mon Apr 29 13:13:57 CEST 2013
This error means that your binaries contain machine instructions that
the processor you run them on does not support. The most probable
cause is that you compiled the binaries on a machine with different
architecture than the one you are running on.
On Mon, Apr 29, 2013 at 11:28 AM, Steven Neumann <s.neumann08 at gmail.com> wrote:
> On Mon, Apr 29, 2013 at 10:11 AM, Steven Neumann <s.neumann08 at gmail.com>wrote:
>> Dear Gmx Users,
>> I produced my trajectory using Gromacs 4.6 on GPUs.
>> When I try:
>> trjconv -s md298_gpu.tpr -f md298_gpu.xtc -pbc mol -ur compact -o
>> Select a group: 0
>> Selected 0: 'System'
>> Reading frame 0 time 0.000
>> Precision of md298_gpu.xtc is 0.001 (nm)
>> Using output precision of 0.001 (nm)
>> Back Off! I just backed up md298_gpuURcomp.xtc to ./#md298_gpuURcomp.xtc.2#
>> Illegal instruction (core dumped)
>> Would you advise?
> What I found out is that options -pbc mol or -pbc whole does not work and
> give this error.
> Any suggestions please?
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