[gmx-users] Reg mpirun error

[Mark Abraham]

Run it again, this time re-directing stderr and stdout to files so
that you can read them later. (Google for how to do that with your
shell.)

Mark

On Sat, Aug 31, 2013 at 1:47 PM, vidhya sankar <scvsankar_agr at yahoo.com> wrote:
> Thank you justin for your reply
>
> The error I have pasted here (also pasted in previous mail)
> is total screen ouptut. No further output as you stated in previous mail( The real error is further up in the
> screen output or in the .log file.)
>
>
>
>>
>  [hinditron at compute002 gromacs-plumed-cpu-input]$ mpirun -np 8
> -machinefile ~/myhosts mdrun_mpi -s CNTPEPRSOLIONSfullcputest.tpr   -v
> -deffnm CNTPEPRSOLIONSfull -cpt 2
>>
>> I have eceived the error as follows
>> Sisters Have Always Fascinated Me" (Speech)
>> Error on node 3, will try to stop all the nodes
>> Halting parallel program mdrun_mpi on CPU 3 out of 8
>> Halting parallel program mdrun_mpi on CPU 4 out of 8
>> gcq#33: "Sisters Have Always Fascinated Me" (Speech)
>> [cli_6]: aborting job:
>> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 6
>> gcq#33: "Sisters Have Always Fascinated Me" (Speech)
>> gcq#33: "Sisters Have Always Fascinated Me" (Speech)
>> [cli_3]: aborting job:
>> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 3
>> [cli_2]:
>> gcq#33: "Sisters Have Always Fascinated Me" (Speech)
>> [cli_5]: aborting job:
>> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 5
>> aborting job:
>> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 2
>> gcq#33: "Sisters Have Always Fascinated Me" (Speech)
>> [cli_4]: aborting job:
>> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 4
>>
>> ===================================================
>> =   BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES
>> =   EXIT CODE: 65280
>> =   CLEANING UP REMAINING PROCESSES
>> =   YOU CAN IGNORE THE BELOW CLEANUP MESSAGES
>>
>  you Mailed me this is generic mpirun  error (These are generic mpirun failure messages)  But No error message shown in .log file
>
>
> Could you please help to solve this error?
>
> With Regards
> S.Vidhyasankar
> --
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