[gmx-users] converting .xpm to .eps

[Nidhi Jatana]

I am using gromacs version 4.6.




On Fri, Dec 20, 2013 at 2:39 PM, bipin singh <bipinelmat at gmail.com> wrote:

> Not sure, might be something going wrong due to large dimension of your
> matrix. Which Gromacs version you are using. Others may provide some clues.
>
>
> On Fri, Dec 20, 2013 at 10:04 AM, Nidhi Jatana <nidhijatana at bic-svc.ac.in
> >wrote:
>
> > Dear Sir/Madam
> > Please find attached the file containing the error.
> >
> > Thanking you
> >
> > Regards
> > --
> > Nidhi Jatana
> > Senior Research Fellow
> > Bioinformatics Center
> > Sri Venkateswara College
> > (University of Delhi)
> > Dhaula Kuan
> > New Delhi-110021.
> >
> >
> >
> > On Thu, Dec 19, 2013 at 7:44 PM, Carsten Kutzner <ckutzne at gwdg.de>
> wrote:
> >
> > > On 12/19/2013 12:53 PM, Nidhi Jatana wrote:
> > >
> > >> Dear Sir/Madam
> > >> I generated the atomic density plot using g_densmap by giving the
> > >> following
> > >> command:
> > >> g_densmap -f *.xtc -s *.pdb -n *.ndx -o *.xpm
> > >>
> > >> The calculation completed successfully but when I am trying to convert
> > >> .xpm
> > >> file to .eps file using xpm2ps command, its giving error and aborts.
> > >>
> > > What is the error message?
> > >
> > > If I use your set of commands with Gromacs 4.6.4, I can successfully
> > create
> > > an EPS file.
> > >
> > > Carsten
> > >
> > >
> > >> xpm2ps -f *.xpm -o *.eps -rainbow red -xpm *.xpm
> > >>
> > >> I have tried many options with setting -bx and -by but of no help. I
> > also
> > >> tried taking the .m2p file but the problem persist. Please find
> attached
> > >> the .m2p file for reference. Please help me with this.
> > >>
> > >> Thanking you
> > >>
> > >> Regards
> > >>   --
> > >> Nidhi Jatana
> > >> Senior Research Fellow
> > >> Bioinformatics Center
> > >> Sri Venkateswara College
> > >> (University of Delhi)
> > >> Dhaula Kuan
> > >> New Delhi-110021.
> > >>
> > >>
> > >>
> > > --
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> --
>
>
>
> *--------------------Thanks and Regards,Bipin Singh*
> --
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-- 
Nidhi Jatana
Senior Research Fellow
Bioinformatics Center
Sri Venkateswara College
(University of Delhi)
Dhaula Kuan
New Delhi-110021.