[gmx-users] About Restraint -NPT Equlibration
vidhya sankar
scvsankar_agr at yahoo.com
Wed Feb 20 15:03:39 CET 2013
Dear Justin,
Thank you for your Previous reply.
I am Doing Protein- Lipid Simulation For My Assembly Of Cyclic Peptide As you Told Me I Have Used The Restraint on water oxygen Atom Along the Z-direction for My NVT equilibration There is No Leakage of water to Hydrophobic part of Lipids O. K
But When I am continuing NPT Equilibration The Water Molecules are Started to Diffuse Slightly to Hydrophobic Part My question is
May I Again use Water Restraint for NPT equilibration? to avoid this Water Diffusion
Thanks IN Advance
More information about the gromacs.org_gmx-users
mailing list