[gmx-users] RMSF: protein flexibility

Tsjerk Wassenaar tsjerkw at gmail.com
Sat Feb 23 11:22:09 CET 2013

Hi Vandna,

You indicate that it should be in the directory where you issue to
command. It's not there. Maybe you used a different name for your
runs? Or you are in the wrong directory?



On Sat, Feb 23, 2013 at 11:18 AM, vandna sharma <vsharma at imtech.res.in> wrote:
> as i want to analyse the local protein mobility, i used
> g_rmsf -s md.tpr -f traj.xtc -oq
> but its showing can not open file md.tpr...can anyone please suggest me from
> where to get md.tpr file ???/
> --
> View this message in context: http://gromacs.5086.n6.nabble.com/RMSF-protein-flexibility-tp5005815.html
> Sent from the GROMACS Users Forum mailing list archive at Nabble.com.
> --
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> * Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

Tsjerk A. Wassenaar, Ph.D.

post-doctoral researcher
Biocomputing Group
Department of Biological Sciences
2500 University Drive NW
Calgary, AB T2N 1N4

More information about the gromacs.org_gmx-users mailing list