[gmx-users] About intial DPPC Pdb
jalemkul at vt.edu
Tue Feb 26 17:03:50 CET 2013
On 2/26/13 11:01 AM, vidhya sankar wrote:
> Dear justin Thank you for your Previous Reply
> I am Doing Lipid Protein Simulation . As stated in your Website for Protein Lipid Tutorial I have Downloaded
> DPPC.pdb . and Did simulation As per Procedure ? My Question is
> Instead of Taking DPPC.pdb Can i take Following Pdb for Embedding Protein in Lipid Medium
> dppc128_npat.pdb 128 DPPC lipids and 3655 water molecules. 1 ns of constant area at 0.629 nm^2.
Use whatever you think is the most suitable model for what you're trying to do.
I have no unique insight into how you should do your project.
Justin A. Lemkul, Ph.D.
Department of Biochemistry
jalemkul[at]vt.edu | (540) 231-9080
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