[gmx-users] About intial DPPC Pdb

Justin Lemkul jalemkul at vt.edu
Tue Feb 26 17:03:50 CET 2013

On 2/26/13 11:01 AM, vidhya sankar wrote:
> Dear  justin Thank you for your Previous Reply
>    I am Doing Lipid Protein Simulation .  As stated in your Website for Protein Lipid Tutorial  I  have Downloaded
> DPPC.pdb . and Did simulation As per Procedure ?  My Question is
>   Instead of Taking DPPC.pdb   Can i take Following  Pdb  for Embedding Protein in Lipid Medium
>      dppc128_npat.pdb    128 DPPC lipids and 3655 water molecules. 1 ns of constant area at 0.629 nm^2.

Use whatever you think is the most suitable model for what you're trying to do. 
  I have no unique insight into how you should do your project.



Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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