[gmx-users] error about pbc

[Tsjerk Wassenaar]

Hi KT,

This is caused by another problem. Your system blew up. Check messages
before this one, and check the log for LINCS warnings.

Cheers,

Tsjerk

On Thu, Jan 24, 2013 at 9:11 AM, Kieu Thu Nguyen <kieuthu2212 at gmail.com>wrote:

> Dear All,
>
> My MD simulation  has an error
>
> Warning: Only triclinic boxes with the first vector parallel to the x-axis
> and the second vector in the xy-plane are supported.
>          Box (3x3):
>             Box[    0]={         nan,          nan,          nan}
>             Box[    1]={         nan,          nan,          nan}
>             Box[    2]={         nan,          nan,          nan}
>          Can not fix pbc.
>
> I searched on Gromacs-errors web, but i did not see this error.
> How can i fix it ?
>
> Thanks and regards,
> KT
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-- 
Tsjerk A. Wassenaar, Ph.D.

post-doctoral researcher
Biocomputing Group
Department of Biological Sciences
2500 University Drive NW
Calgary, AB T2N 1N4
Canada