[gmx-users] Compilation error

[Justin Lemkul]

On 6/2/13 9:03 AM, vidhya sankar wrote:
> Dear Gromacs user Thank you for your previous reply
>           When i Compile gromacs 4.5.6 I have Gor following error
>
> collect2: ld returned 1 exit status
> make[3]: *** [grompp] Error 1
> make[3]: Leaving directory `/root/gromacs-4.5.6/src/kernel'
> make[2]: *** [all-recursive] Error 1
> make[2]: Leaving directory `/root/gromacs-4.5.6/src'
> make[1]: *** [all] Error 2
> make[1]: Leaving directory `/root/gromacs-4.5.6/src'
> make: *** [all-recursive] Error 1
>
> I configure with Following Command
> ./configure --enable-double --with-fft=fftpack  --program-suffix=_d
>
> I Have fftw3.3.2 but i have Not used that I am using the deh=fault fftpack

Using fftpack will be much slower than FFTW.

> How to Solve this error
> What  went wrong?
>

No idea.  The real error message precedes the output you posted.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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