[gmx-users] Setting total simulation time
Mark Abraham
mark.j.abraham at gmail.com
Mon Jun 3 17:02:58 CEST 2013
Try smaller numbers and periods for a test run, and see the machinery work.
gmxcheck on the output files is your friend!
Mark
On Mon, Jun 3, 2013 at 4:40 PM, Parker de Waal <Parker.deWaal09 at kzoo.edu>wrote:
> Hi GMX-users,
>
> If I wanted to run a 1 ns simulation take snapshots every 1 ps would these
> be the correct input parameters?
>
> Thanks!
>
> ; Run parameters
> integrator = md
> nsteps = 500000
> dt = 0.002
> ; Output control
> nstxout = 1000
> nstvout = 1000
> nstenergy = 1000
> nstlog = 1000
> --
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