[gmx-users] Genbox center of box

Justin Lemkul jalemkul at vt.edu
Mon Jun 10 18:15:41 CEST 2013

On 6/10/13 12:13 PM, Matt Bawn wrote:
> I am beginning a simulation of my system following the lysozyme tutorial
> but when I try to use genbox to solvate my system it asks me to provide the
> coordinates of the center of the box. I have previously been successfully
> able to enter the same commands without this prompt appearing from gromacs.
> Can anyone let me know what I'm doing wrong please?

Can you please provide your exact sequence of commands (up to, and including, 
genbox) and the exact error message (copied and pasted from the terminal)? 
Which version of Gromacs are you using?



Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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