[gmx-users] sequentially fitting each frame of one trajectory to each frame of another trajectory

Thomas Evangelidis tevang3 at gmail.com
Mon Jun 17 12:55:27 CEST 2013

Dear GROMACS list,

I used minVar to remove global rotations and translations from a
trajectory, but due to memory issues I used a replica with only the
backbone of the protein. Now I want to fit each frame of the original
protein trajectory to the respective frame of the processed backbone
trajectory. Is there any GMX tool that can do that?




Thomas Evangelidis

PhD student
University of Athens
Faculty of Pharmacy
Department of Pharmaceutical Chemistry
157 71 Athens

email: tevang at pharm.uoa.gr

          tevang3 at gmail.com

website: https://sites.google.com/site/thomasevangelidishomepage/

More information about the gromacs.org_gmx-users mailing list